C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023153 Tmem52 10090 + 4:155469114-155470858 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023920 Tmem52-001 155469131-155470857 protein_coding
  ENSMUST00000131599 Tmem52-002 155469114-155470415 retained_intron
  ENSMUST00000145796 Tmem52-003 155469147-155470789 retained_intron
  ENSMUST00000178188 Tmem52-201 155469114-155470858 protein_coding
  ENSMUST00000178238 Tmem52-202 155469114-155470858 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023920ENSMUST00000131599ENSMUST00000145796ENSMUST00000178188ENSMUST00000178238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023920 0.507±0.17 26.183±13.48 0.458±0.25 0.072±0.02 5.838±6.40 0.561±0.20 N/A 2.899±0.68 0.104±0.07 0.731±0.15 23.765±5.11 3.157±0.98 0.121±0.00 4.218±0.00
ENSMUST00000131599 0.974±0.00 N/A 0.453±0.00 0.224±0.00 10.050±7.10 0.556±0.18 0.511±0.22 1.336±0.29 0.058±0.04 0.454±0.13 14.543±3.14 2.489±1.66 0.214±0.00 1.855±0.41
ENSMUST00000145796 0.325±0.00 11.564±6.24 0.147±0.02 0.052±0.00 2.314±2.39 0.513±0.15 0.481±0.35 1.118±0.46 N/A 0.494±0.10 6.808±1.47 1.981±0.75 0.123±0.08 2.519±0.00
ENSMUST00000178188 0.155±0.05 N/A N/A N/A 0.166±0.00 N/A 0.194±0.00 N/A 0.045±0.03 N/A N/A 1.507±0.64 0.211±0.00 1.163±0.00
ENSMUST00000178238 0.179±0.01 6.238±2.24 N/A 0.035±0.00 1.462±1.32 N/A 0.286±0.15 0.656±0.09 N/A N/A 5.530±1.35 1.563±0.63 N/A 1.802±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000178821 TMEM52 transmembrane protein 52 protein_coding Homo_sapiens

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