C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: erythrocyte protein band 4.2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023216 Epb4.2 10090 - 2:121017891-121037072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023987 Epb4.2-002 121023650-121036835 protein_coding
  ENSMUST00000102490 Epb4.2-001 121017891-121037072 protein_coding
  ENSMUST00000124703 Epb4.2-003 121018222-121027260 processed_transcript
  ENSMUST00000128360 Epb4.2-006 121027707-121036681 processed_transcript
  ENSMUST00000145812 Epb4.2-007 121019408-121022016 retained_intron
  ENSMUST00000147444 Epb4.2-004 121018222-121022806 processed_transcript
  ENSMUST00000152217 Epb4.2-005 121033404-121036745 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023987ENSMUST00000102490ENSMUST00000124703ENSMUST00000128360ENSMUST00000145812ENSMUST00000147444ENSMUST00000152217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023987 0.011±0.00 N/A N/A 0.019±0.01 N/A N/A 0.049±0.03 N/A 15.789±13.53 0.013±0.00 0.016±0.00 0.091±0.08 0.809±0.53 N/A
ENSMUST00000102490 N/A N/A N/A 0.024±0.02 N/A 0.071±0.00 0.091±0.06 0.026±0.01 41.448±13.41 0.036±0.01 N/A 0.087±0.04 0.626±0.77 N/A
ENSMUST00000124703 0.046±0.00 N/A 0.045±0.00 0.020±0.01 0.050±0.00 N/A 0.010±0.00 0.064±0.02 14.678±11.66 0.052±0.00 N/A 0.087±0.08 0.609±0.52 N/A
ENSMUST00000128360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.178±0.00 0.839±0.00 N/A
ENSMUST00000145812 0.049±0.01 N/A N/A 0.056±0.00 N/A N/A N/A 0.292±0.08 0.059±0.01 0.071±0.00 N/A 0.109±0.02 N/A N/A
ENSMUST00000147444 0.054±0.01 0.084±0.00 0.060±0.00 0.013±0.00 0.024±0.00 N/A N/A 0.173±0.05 11.115±0.00 0.034±0.00 N/A 0.226±0.16 1.141±0.54 0.025±0.00
ENSMUST00000152217 N/A N/A N/A 0.114±0.00 N/A 0.192±0.00 N/A N/A N/A N/A N/A 0.071±0.00 1.391±0.84 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0008360 IEA regulation of cell shape
GO:0016020 IDA membrane
GO:0018149 IEA peptide cross-linking
GO:0020027 IMP hemoglobin metabolic process
GO:0030863 IDA cortical cytoskeleton
GO:0043249 IEA erythrocyte maturation
GO:0048536 IMP spleen development
GO:0050801 IMP ion homeostasis
GO:0055072 IMP iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074155 tgm5l transglutaminase 5, like protein_coding Danio_rerio
ENSDARG00000097651 tgm8 transglutaminase 8 protein_coding Danio_rerio
ENSG00000166947 EPB42 erythrocyte membrane protein band 4.2 protein_coding Homo_sapiens

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