C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secretogranin V
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023236 Scg5 10090 - 2:113776362-113829121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024005 Scg5-001 113776362-113829121 protein_coding
  ENSMUST00000139975 Scg5-002 113827340-113828762 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024005ENSMUST00000139975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024005 0.254±0.22 9.420±2.78 0.489±0.02 45.184±6.15 0.206±0.16 2.881±0.73 0.037±0.01 4.321±0.31 0.066±0.04 0.377±0.05 0.073±0.05 2.102±0.77 0.789±0.79 0.562±0.09
ENSMUST00000139975 N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A 0.097±0.07 0.129±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0002 VISTA 2:113391542-113992644
CIL_00065T CIL_00065T_0002 CGP 2:113746164-113829121

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004857 IDA enzyme inhibitor activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0006886 IDA intracellular protein transport
GO:0007218 IEA neuropeptide signaling pathway
GO:0016486 IDA peptide hormone processing
GO:0030141 ISS secretory granule
GO:0043086 IDA negative regulation of catalytic activity
GO:0046883 IDA regulation of hormone secretion
GO:0051082 ISS unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032126 scg5 secretogranin V protein_coding Danio_rerio
ENSDARG00000077045 scg5 secretogranin V protein_coding Danio_rerio
ENSG00000166922 SCG5 secretogranin V (7B2 protein) protein_coding Homo_sapiens

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