C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sfi1 homolog, spindle assembly associated (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023764 Sfi1 10090 - 11:3131850-3193463 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066391 Sfi1-001 3131881-3193463 protein_coding
  ENSMUST00000081318 Sfi1-017 3131850-3193407 protein_coding
  ENSMUST00000101655 Sfi1-020 3131850-3189056 protein_coding
  ENSMUST00000118627 Sfi1-012 3185568-3193424 protein_coding
  ENSMUST00000126746 Sfi1-015 3131888-3164597 nonsense_mediated_decay
  ENSMUST00000132893 Sfi1-003 3131889-3193460 nonsense_mediated_decay
  ENSMUST00000133882 Sfi1-014 3144220-3146356 processed_transcript
  ENSMUST00000137633 Sfi1-007 3131890-3142378 retained_intron
  ENSMUST00000138126 Sfi1-019 3134932-3193421 retained_intron
  ENSMUST00000140846 Sfi1-016 3131887-3189052 protein_coding
  ENSMUST00000141422 Sfi1-008 3153384-3177493 processed_transcript
  ENSMUST00000142315 Sfi1-013 3165576-3193424 protein_coding
  ENSMUST00000143442 Sfi1-004 3160035-3176466 processed_transcript
  ENSMUST00000144359 Sfi1-005 3131889-3193411 retained_intron
  ENSMUST00000144447 Sfi1-011 3131887-3136007 retained_intron
  ENSMUST00000144778 Sfi1-018 3131887-3193439 retained_intron
  ENSMUST00000146888 Sfi1-006 3144881-3146722 retained_intron
  ENSMUST00000153425 Sfi1-009 3131886-3189056 protein_coding
  ENSMUST00000155763 Sfi1-002 3165625-3187355 protein_coding
  ENSMUST00000156655 Sfi1-010 3156812-3170704 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066391ENSMUST00000081318ENSMUST00000126746ENSMUST00000132893ENSMUST00000137633ENSMUST00000138126ENSMUST00000144359ENSMUST00000144447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066391 6.799±2.65 6.544±1.49 9.859±0.45 5.705±1.69 6.155±1.71 4.363±1.82 1.965±0.34 2.873±0.79 3.109±0.79 7.212±1.22 2.224±0.26 9.581±2.38 14.417±2.02 7.192±0.83
ENSMUST00000081318 N/A N/A N/A 32.692±0.00 N/A N/A N/A N/A N/A N/A N/A 7.066±3.96 18.465±0.00 N/A
ENSMUST00000126746 3.031±0.00 4.046±0.85 N/A N/A 3.787±0.49 3.402±0.00 N/A 2.306±0.00 N/A N/A N/A 5.456±0.48 N/A N/A
ENSMUST00000132893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.639±0.00
ENSMUST00000137633 4.060±0.51 6.886±1.52 6.278±0.00 N/A 5.926±2.10 4.055±0.38 N/A 3.204±1.10 2.292±0.20 2.949±0.00 N/A 6.210±1.38 N/A N/A
ENSMUST00000138126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.441±0.00 N/A N/A
ENSMUST00000144359 N/A N/A N/A 28.002±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.778±3.46 N/A
ENSMUST00000144447 3.650±1.47 3.098±0.58 4.349±0.33 17.830±7.26 6.557±1.76 3.579±0.55 1.706±0.05 2.716±0.31 2.166±0.55 8.596±1.43 N/A 5.759±1.15 9.162±1.96 4.276±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0010923 ISS negative regulation of phosphatase activity
GO:0019902 ISS phosphatase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053992 sfi1 Sfi1 homolog, spindle assembly associated (yeast) protein_coding Danio_rerio
ENSG00000198089 SFI1 Sfi1 homolog, spindle assembly associated (yeast) protein_coding Homo_sapiens

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