C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 29 (nucleoside transporters), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023942 Slc29a1 10090 - 17:45585200-45599606 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051574 Slc29a1-201 45585203-45595572 protein_coding
  ENSMUST00000064889 Slc29a1-002 45585203-45595570 protein_coding
  ENSMUST00000097317 Slc29a1-006 45585203-45595903 protein_coding
  ENSMUST00000163492 Slc29a1-007 45585200-45592575 protein_coding
  ENSMUST00000163905 Slc29a1-021 45589523-45593634 protein_coding
  ENSMUST00000164217 Slc29a1-004 45588367-45595602 protein_coding
  ENSMUST00000164618 Slc29a1-015 45589517-45595852 protein_coding
  ENSMUST00000164769 Slc29a1-008 45585671-45592262 protein_coding
  ENSMUST00000166119 Slc29a1-005 45585542-45592497 protein_coding
  ENSMUST00000166633 Slc29a1-012 45589417-45599604 protein_coding
  ENSMUST00000167195 Slc29a1-016 45589722-45595556 protein_coding
  ENSMUST00000167332 Slc29a1-019 45589957-45595541 protein_coding
  ENSMUST00000167692 Slc29a1-003 45585202-45593640 protein_coding
  ENSMUST00000167748 Slc29a1-023 45588868-45590111 retained_intron
  ENSMUST00000167863 Slc29a1-017 45589207-45595551 retained_intron
  ENSMUST00000168274 Slc29a1-013 45590112-45597066 protein_coding
  ENSMUST00000169729 Slc29a1-011 45589697-45599606 protein_coding
  ENSMUST00000170113 Slc29a1-014 45590069-45595957 protein_coding
  ENSMUST00000170425 Slc29a1-020 45589417-45595515 retained_intron
  ENSMUST00000170488 Slc29a1-018 45590023-45595543 protein_coding
  ENSMUST00000171081 Slc29a1-022 45588366-45595502 protein_coding
  ENSMUST00000171847 Slc29a1-001 45585200-45599603 protein_coding
  ENSMUST00000171876 Slc29a1-009 45588520-45592840 retained_intron
  ENSMUST00000171978 Slc29a1-024 45586218-45588741 processed_transcript
  ENSMUST00000172301 Slc29a1-010 45589772-45595502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051574ENSMUST00000064889ENSMUST00000097317ENSMUST00000163492ENSMUST00000163905ENSMUST00000164217ENSMUST00000164769ENSMUST00000167748ENSMUST00000171081ENSMUST00000171847ENSMUST00000171876ENSMUST00000171978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051574 9.274±3.16 27.852±0.00 18.325±0.00 N/A 13.963±2.27 9.742±2.51 11.763±4.92 7.076±1.82 38.241±19.52 14.516±3.95 7.253±0.00 13.749±7.46 4.759±0.59 N/A
ENSMUST00000064889 30.662±8.12 77.121±10.86 27.313±2.24 5.557±3.33 31.423±11.54 17.797±3.88 26.243±6.57 18.117±4.63 57.455±19.60 42.801±5.85 6.352±0.79 37.364±8.83 11.649±6.38 33.311±0.96
ENSMUST00000097317 N/A N/A 17.881±0.00 4.047±0.00 N/A 5.942±0.00 N/A N/A 55.186±0.00 N/A 1.920±0.00 12.948±0.00 N/A 12.883±6.48
ENSMUST00000163492 N/A N/A N/A N/A N/A N/A 13.203±0.00 N/A N/A N/A 2.950±0.56 N/A N/A N/A
ENSMUST00000163905 N/A N/A N/A N/A N/A N/A N/A N/A 109.245±0.00 N/A N/A N/A N/A N/A
ENSMUST00000164217 18.583±0.62 69.829±11.55 N/A 5.898±0.00 24.616±2.16 13.971±3.21 15.200±0.00 10.819±0.00 N/A 26.987±5.05 N/A 27.557±5.21 N/A N/A
ENSMUST00000164769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.900±0.00 N/A N/A N/A
ENSMUST00000167748 N/A N/A N/A 3.532±0.00 N/A N/A N/A N/A N/A N/A N/A 21.267±10.53 9.869±0.00 N/A
ENSMUST00000171081 N/A N/A N/A N/A N/A N/A N/A N/A 96.304±0.00 N/A N/A N/A N/A N/A
ENSMUST00000171847 N/A N/A N/A N/A N/A 6.484±0.00 N/A N/A 8.791±0.00 N/A 2.302±0.00 N/A N/A N/A
ENSMUST00000171876 N/A N/A N/A 1.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.378±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DS CIL_0008DS_0002 VISTA 17:45025360-45628753

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005337 IDA nucleoside transmembrane transporter activity
GO:0005886 IEA plasma membrane
GO:0007595 IEA lactation
GO:0015858 IDA nucleoside transport
GO:0015862 IEA uridine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 ISS basolateral plasma membrane
GO:0016324 ISS apical plasma membrane
GO:0030431 IEA sleep
GO:0060079 IEA regulation of excitatory postsynaptic membrane potential
GO:0071333 IEA cellular response to glucose stimulus
GO:0071456 IEA cellular response to hypoxia
GO:1901642 IEA:IDA nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031651 slc29a1a solute carrier family 29 (nucleoside transporters), member 1a protein_coding Danio_rerio
ENSDARG00000054447 SLC29A1 (2 of 2) solute carrier family 29 (equilibrative nucleoside transporter), member 1 protein_coding Danio_rerio
ENSG00000112759 SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1 protein_coding Homo_sapiens

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