C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nudix (nucleotide diphosphate linked moiety X)-type motif 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024213 Nudt3 10090 - 17:27579382-27623465 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025050 Nudt3-001 27579382-27623465 protein_coding
  ENSMUST00000062397 Nudt3-008 27580788-27623263 protein_coding
  ENSMUST00000114886 Nudt3-003 27580574-27622964 protein_coding
  ENSMUST00000127236 Nudt3-006 27580952-27611670 processed_transcript
  ENSMUST00000133048 Nudt3-007 27580705-27583319 retained_intron
  ENSMUST00000146321 Nudt3-005 27596605-27623263 retained_intron
  ENSMUST00000156429 Nudt3-004 27580833-27622393 processed_transcript
  ENSMUST00000176458 Nudt3-009 27582034-27622844 protein_coding
  ENSMUST00000176876 Nudt3-002 27581961-27623263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025050ENSMUST00000156429ENSMUST00000176876
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025050 26.012±4.64 78.405±29.29 36.043±3.53 73.692±20.98 37.106±16.45 37.974±6.29 36.227±12.66 30.935±2.57 14.548±3.41 31.519±4.49 61.510±9.18 57.475±14.91 14.696±6.26 29.401±6.60
ENSMUST00000156429 N/A N/A N/A 893.297±0.00 N/A N/A N/A N/A N/A N/A N/A 227.677±249.37 254.376±97.16 870.186±0.00
ENSMUST00000176876 N/A N/A N/A 298.472±0.00 N/A N/A N/A N/A N/A N/A N/A 151.077±0.00 105.761±0.00 446.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PV CIL_0001PV_0003 CGP 17:27579382-27636629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0005737 IEA cytoplasm
GO:0008152 IEA metabolic process
GO:0008486 ISS diphosphoinositol-polyphosphate diphosphatase activity
GO:0016787 IEA hydrolase activity
GO:0052840 IEA inositol diphosphate tetrakisphosphate diphosphatase activity
GO:0052843 IEA inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity
GO:0052844 IEA inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity
GO:0052845 IEA inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity
GO:0052846 IEA inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity
GO:0052847 IEA inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity
GO:0052848 IEA inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0071544 ISS diphosphoinositol polyphosphate catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016256 nudt3a nudix (nucleoside diphosphate linked moiety X)-type motif 3a protein_coding Danio_rerio
ENSDARG00000042123 nudt3b nudix (nucleoside diphosphate linked moiety X)-type motif 3b protein_coding Danio_rerio
ENSG00000272325 NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 protein_coding Homo_sapiens

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