C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 523
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024220 Zfp523 10090 + 17:28177207-28205886 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002318 Zfp523-005 28177418-28205884 protein_coding
  ENSMUST00000073534 Zfp523-001 28177339-28205886 protein_coding
  ENSMUST00000129522 Zfp523-004 28202466-28205886 nonsense_mediated_decay
  ENSMUST00000133868 Zfp523-008 28197785-28202478 protein_coding
  ENSMUST00000145313 Zfp523-002 28177207-28205886 retained_intron
  ENSMUST00000151595 Zfp523-006 28204109-28205307 retained_intron
  ENSMUST00000155030 Zfp523-007 28202291-28205162 protein_coding
  ENSMUST00000161275 Zfp523-009 28189933-28197800 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002318ENSMUST00000073534ENSMUST00000129522ENSMUST00000133868ENSMUST00000145313ENSMUST00000155030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002318 N/A N/A N/A N/A N/A 2.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000073534 7.576±0.88 11.082±0.74 5.589±0.26 11.423±1.83 5.062±1.41 5.209±1.02 2.501±0.88 7.425±0.40 3.624±0.67 6.627±0.70 4.580±0.31 14.266±4.53 2.725±1.15 14.757±5.64
ENSMUST00000129522 N/A N/A N/A N/A N/A 7.666±0.93 N/A N/A 4.227±0.00 N/A N/A N/A 1.871±0.00 N/A
ENSMUST00000133868 N/A N/A N/A 21.296±0.00 N/A N/A N/A N/A N/A N/A N/A 13.186±0.00 2.222±1.42 6.267±0.00
ENSMUST00000145313 4.987±1.55 10.605±0.72 2.629±0.37 8.502±3.06 4.292±1.44 3.740±0.66 3.102±0.94 5.296±1.17 1.493±0.37 5.393±1.19 1.337±0.60 14.523±4.28 1.466±0.96 3.867±1.23
ENSMUST00000155030 N/A N/A N/A 18.926±0.00 10.894±0.00 N/A N/A N/A N/A N/A N/A 12.450±0.00 3.304±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002ES CIL_0002ES_0002 CGP 17:28142316-28205886
CIL_0002ER CIL_0002ER_0002 CGP 17:28177207-28228608

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013279 ZNF76 zinc finger protein 76 protein_coding Danio_rerio
ENSG00000065029 ZNF76 zinc finger protein 76 protein_coding Homo_sapiens

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