C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dystrobrevin alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024302 Dtna 10090 + 18:23415415-23659714 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047954 Dtna-201 23415415-23604230 protein_coding
  ENSMUST00000115832 Dtna-202 23415415-23659714 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047954ENSMUST00000115832
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047954 N/A N/A N/A N/A 2.381±0.98 N/A 10.119±1.00 N/A 0.035±0.02 N/A 7.514±1.22 0.339±0.00 N/A 1.302±0.00
ENSMUST00000115832 0.555±0.09 0.700±0.04 8.592±0.71 5.649±3.08 1.044±0.65 0.838±0.35 1.609±0.13 0.572±0.14 0.026±0.02 4.119±1.15 6.871±0.30 0.746±0.47 0.725±0.36 1.300±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PG CIL_0006PG_0002 CGP 18:22693181-23659714
CIL_00064W CIL_00064W_0002 CGP 18:23415415-23893861

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016014 NAS dystrobrevin complex
GO:0030054 IEA cell junction
GO:0030165 IEA PDZ domain binding
GO:0030424 IEA axon
GO:0031234 IEA extrinsic component of cytoplasmic side of plasma membrane
GO:0042383 TAS sarcolemma
GO:0042995 IEA cell projection
GO:0043234 ISO protein complex
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031015 dtna dystrobrevin, alpha protein_coding Danio_rerio
ENSG00000134769 DTNA dystrobrevin, alpha protein_coding Homo_sapiens

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