C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAH (Asp-Glu-Ala-His) box polypeptide 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024422 Dhx16 10090 + 17:35879819-35892670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025292 Dhx16-001 35879819-35892670 protein_coding
  ENSMUST00000172730 Dhx16-003 35887679-35889594 retained_intron
  ENSMUST00000173596 Dhx16-007 35888026-35889492 retained_intron
  ENSMUST00000173967 Dhx16-008 35889281-35892666 protein_coding
  ENSMUST00000174308 Dhx16-006 35890733-35892553 retained_intron
  ENSMUST00000174330 Dhx16-005 35887942-35888741 retained_intron
  ENSMUST00000174366 Dhx16-002 35879825-35892625 nonsense_mediated_decay
  ENSMUST00000174449 Dhx16-004 35887936-35888653 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025292ENSMUST00000172730ENSMUST00000174366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025292 11.283±1.16 7.600±2.32 10.851±2.20 7.436±3.13 10.883±4.59 8.476±3.21 5.392±0.59 10.393±2.38 8.192±5.03 12.311±2.83 4.679±0.51 9.006±1.69 11.570±2.76 23.911±3.16
ENSMUST00000172730 14.532±0.91 14.268±1.83 13.882±0.00 13.179±0.00 12.262±4.87 15.505±2.83 4.515±0.92 12.516±3.98 13.588±5.67 18.708±3.36 N/A 25.202±10.60 10.500±1.05 15.241±1.63
ENSMUST00000174366 N/A N/A N/A 5.285±0.00 6.910±3.71 N/A 2.058±0.34 N/A 2.670±0.31 N/A 1.128±0.00 11.967±5.93 7.849±3.68 6.930±4.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013150 dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein_coding Danio_rerio
ENSG00000204560 DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 protein_coding Homo_sapiens

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