C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, M region locus 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024459 H2-M5 10090 - 17:36984061-36989537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113667 H2-M5-004 36987497-36989045 protein_coding
  ENSMUST00000145260 H2-M5-003 36984061-36989537 retained_intron
  ENSMUST00000169189 H2-M5-001 36986855-36989504 protein_coding
  ENSMUST00000176712 H2-M5-002 36987115-36989188 protein_coding
  ENSMUST00000176784 H2-M5-005 36987115-36989188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113667ENSMUST00000145260ENSMUST00000176712ENSMUST00000176784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113667 N/A N/A N/A 1.057±0.00 0.337±0.00 0.205±0.01 N/A N/A N/A N/A 0.083±0.00 0.842±0.08 0.836±0.00 N/A
ENSMUST00000145260 0.153±0.09 0.030±0.00 1.359±0.50 3.546±2.42 0.138±0.06 0.036±0.01 0.054±0.01 0.034±0.02 0.039±0.02 0.378±0.09 0.023±0.01 0.201±0.12 0.059±0.02 0.217±0.10
ENSMUST00000176712 N/A N/A N/A N/A N/A N/A 0.073±0.04 0.013±0.00 0.033±0.00 0.395±0.00 0.052±0.02 0.486±0.26 0.067±0.00 0.330±0.00
ENSMUST00000176784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.01 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0006955 IEA immune response
GO:0016021 IEA integral component of membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex

Homologs

No Homologs available.

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