C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoserine aminotransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024640 Psat1 10090 - 19:15904678-15947337 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025542 Psat1-001 15904678-15925059 protein_coding
  ENSMUST00000159264 Psat1-006 15916839-15918337 processed_transcript
  ENSMUST00000160170 Psat1-005 15918403-15921409 retained_intron
  ENSMUST00000161707 Psat1-003 15905130-15909712 retained_intron
  ENSMUST00000162053 Psat1-002 15905127-15924622 protein_coding
  ENSMUST00000162233 Psat1-004 15920500-15924930 retained_intron
  ENSMUST00000162416 Psat1-007 15915009-15947337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025542ENSMUST00000161707ENSMUST00000162053ENSMUST00000162416
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025542 17.513±6.75 6.896±0.39 3.190±0.83 18.428±10.26 7.460±2.45 1.743±0.55 0.800±0.20 8.010±1.05 50.894±40.63 2.751±0.65 0.423±0.21 5.468±1.65 37.276±34.88 3.220±1.54
ENSMUST00000161707 N/A 2.169±0.00 1.296±0.00 8.213±1.40 3.201±0.95 N/A N/A N/A 13.458±13.74 0.614±0.00 0.305±0.10 2.454±0.00 2.375±0.00 2.294±0.43
ENSMUST00000162053 N/A 1.391±0.16 1.757±1.00 16.303±8.01 2.127±0.00 0.353±0.14 0.339±0.11 2.796±0.61 10.732±11.13 0.620±0.02 0.156±0.03 2.909±3.09 20.486±11.94 3.296±0.00
ENSMUST00000162416 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V7 CIL_0007V7_0002 VISTA 19:15500831-16104666
CIL_00091W CIL_00091W_0002 VISTA 19:15535662-16138956

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004648 IEA O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0006564 IEA L-serine biosynthetic process
GO:0008152 IEA metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016733 psat1 phosphoserine aminotransferase 1 protein_coding Danio_rerio
ENSG00000135069 PSAT1 phosphoserine aminotransferase 1 protein_coding Homo_sapiens

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