C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell division cycle associated 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024791 Cdca5 10090 + 19:6084983-6091777 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025704 Cdca5-001 6084983-6091777 protein_coding
  ENSMUST00000152528 Cdca5-003 6085827-6091777 processed_transcript
  ENSMUST00000156961 Cdca5-002 6085751-6091777 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025704ENSMUST00000152528ENSMUST00000156961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025704 0.837±0.74 0.473±0.17 0.263±0.10 2.755±2.71 0.581±0.22 1.875±0.70 0.081±0.03 0.174±0.05 13.503±12.15 0.404±0.05 0.175±0.00 3.976±1.41 5.918±4.44 10.616±3.87
ENSMUST00000152528 0.049±0.02 0.221±0.09 0.188±0.14 0.678±0.00 0.347±0.25 1.129±0.64 0.043±0.03 0.287±0.06 0.862±1.52 0.137±0.00 0.040±0.01 1.427±0.72 3.108±2.92 0.764±0.00
ENSMUST00000156961 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.25 N/A 0.432±0.00 0.118±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 ISS G1/S transition of mitotic cell cycle
GO:0000785 IDA chromatin
GO:0000790 IDA nuclear chromatin
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006302 ISS double-strand break repair
GO:0007064 IGI mitotic sister chromatid cohesion
GO:0007067 IDA mitotic nuclear division
GO:0007076 ISS mitotic chromosome condensation
GO:0007080 ISS mitotic metaphase plate congression
GO:0008278 IDA cohesin complex
GO:0071922 ISS regulation of cohesin localization to chromatin

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000146670 CDCA5 cell division cycle associated 5 protein_coding Homo_sapiens

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