C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 7 superfamily member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024799 Tm7sf2 10090 - 19:6062821-6068373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025713 Tm7sf2-001 6062821-6067842 protein_coding
  ENSMUST00000113543 Tm7sf2-006 6062822-6067842 protein_coding
  ENSMUST00000159084 Tm7sf2-007 6062821-6067803 protein_coding
  ENSMUST00000159836 Tm7sf2-011 6066579-6067561 retained_intron
  ENSMUST00000160028 Tm7sf2-002 6067163-6068373 protein_coding
  ENSMUST00000160354 Tm7sf2-008 6065527-6067776 retained_intron
  ENSMUST00000160417 Tm7sf2-005 6066129-6067850 retained_intron
  ENSMUST00000161090 Tm7sf2-013 6062901-6067803 nonsense_mediated_decay
  ENSMUST00000161528 Tm7sf2-004 6066187-6067855 protein_coding
  ENSMUST00000161718 Tm7sf2-010 6062978-6067808 protein_coding
  ENSMUST00000162549 Tm7sf2-003 6066146-6067867 retained_intron
  ENSMUST00000162575 Tm7sf2-014 6063822-6067785 protein_coding
  ENSMUST00000162721 Tm7sf2-012 6066185-6067092 retained_intron
  ENSMUST00000162810 Tm7sf2-009 6064093-6067808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000025713ENSMUST00000161718
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000025713 18.372±1.34 42.626±2.92 15.790±3.23 26.472±2.43 20.730±2.96 33.865±3.42 16.522±1.46 140.698±94.25 17.881±0.89 3.763±0.68 23.587±3.73 23.250±0.98
ENSMUST00000161718 N/A N/A N/A N/A 15.556±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006695 IEA cholesterol biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016628 IEA oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO:0043235 ISO receptor complex
GO:0050613 IEA delta14-sterol reductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032816 tm7sf2 transmembrane 7 superfamily member 2 protein_coding Danio_rerio
ENSG00000149809 TM7SF2 transmembrane 7 superfamily member 2 protein_coding Homo_sapiens

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