C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hyaluronic acid binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025075 Habp2 10090 + 19:56287137-56320822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078284 Habp2-001 56287137-56320089 protein_coding
  ENSMUST00000095948 Habp2-002 56287922-56320822 protein_coding
  ENSMUST00000163502 Habp2-006 56311814-56316417 protein_coding
  ENSMUST00000165407 Habp2-003 56287936-56311988 processed_transcript
  ENSMUST00000165522 Habp2-007 56312948-56319629 nonsense_mediated_decay
  ENSMUST00000166049 Habp2-005 56287996-56319635 protein_coding
  ENSMUST00000171341 Habp2-004 56287996-56316295 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastKidneyLiverOvaryPlacentaTestisENSMUST00000078284ENSMUST00000095948ENSMUST00000163502ENSMUST00000165407ENSMUST00000165522ENSMUST00000166049ENSMUST00000171341
Transcript ID Adipose Adrenal Bladder Breast Kidney Liver Ovary Placenta Testis
ENSMUST00000078284 N/A N/A N/A 0.103±0.00 69.690±2.95 57.902±23.21 0.229±0.00 13.212±14.77 0.025±0.00
ENSMUST00000095948 0.022±0.00 N/A 0.039±0.00 N/A N/A 3.819±0.00 N/A 0.026±0.00 0.021±0.00
ENSMUST00000163502 N/A 0.127±0.05 N/A N/A N/A N/A 0.607±0.01 1.419±1.36 N/A
ENSMUST00000165407 0.340±0.00 0.099±0.04 N/A 0.291±0.07 60.908±7.67 69.290±7.30 N/A N/A N/A
ENSMUST00000165522 N/A N/A N/A 0.187±0.00 N/A N/A N/A 0.840±0.75 0.069±0.00
ENSMUST00000166049 0.128±0.00 N/A N/A N/A N/A N/A N/A 0.646±0.56 N/A
ENSMUST00000171341 N/A N/A N/A N/A N/A N/A N/A 0.726±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0002 CGP 19:55741810-56320822
CIL_0006OW CIL_0006OW_0002 CGP 19:56287137-56390037

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057498 habp2 hyaluronan binding protein 2 protein_coding Danio_rerio
ENSG00000148702 HABP2 hyaluronan binding protein 2 protein_coding Homo_sapiens

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