C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GLI-Kruppel family member GLI1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025407 Gli1 10090 - 10:127329889-127341589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026474 Gli1-201 127329889-127341589 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026474 14.566±13.63 2.040±1.04 7.150±1.59 1.354±0.41 1.725±0.46 4.676±2.45 0.536±0.23 0.483±0.19 0.750±0.42 2.464±0.57 0.303±0.14 10.477±6.08 1.173±0.18 0.507±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039K CIL_00039K_0002 CGP 10:127296221-127329943

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003705 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0005929 IDA cilium
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0007224 IGI smoothened signaling pathway
GO:0007283 IDA spermatogenesis
GO:0007418 IGI ventral midline development
GO:0008017 IDA microtubule binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0009913 IEA epidermal cell differentiation
GO:0009953 IGI dorsal/ventral pattern formation
GO:0009954 IGI proximal/distal pattern formation
GO:0021696 IGI cerebellar cortex morphogenesis
GO:0021938 IGI smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation
GO:0021983 IGI pituitary gland development
GO:0030324 IGI lung development
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045740 IEA positive regulation of DNA replication
GO:0045880 IEA positive regulation of smoothened signaling pathway
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0060032 IGI notochord regression
GO:0072372 IDA primary cilium
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111087 GLI1 GLI family zinc finger 1 protein_coding Homo_sapiens

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