C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: msh homeobox 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025469 Msx3 10090 - 7:140046157-140049089 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055353 Msx3-002 140046157-140049089 protein_coding
  ENSMUST00000172775 Msx3-001 140046374-140049088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungOvaryPlacentaTestisENSMUST00000055353ENSMUST00000172775
Transcript ID Bladder Brain Breast Colon Heart Lung Ovary Placenta Testis
ENSMUST00000055353 N/A 0.214±0.00 N/A N/A N/A N/A 0.136±0.07 N/A 0.048±0.00
ENSMUST00000172775 0.019±0.01 0.836±0.29 0.103±0.09 0.071±0.04 0.015±0.00 0.018±0.00 0.598±0.27 0.006±0.00 0.096±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0007275 IEA multicellular organismal development
GO:0035067 IGI negative regulation of histone acetylation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007641 msxe muscle segment homeobox E protein_coding Danio_rerio

Loading