C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: muskelin 1, intracellular mediator containing kelch motifs
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025609 Mkln1 10090 + 6:31398735-31516811 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026699 Mkln1-001 31398735-31516811 protein_coding
  ENSMUST00000130108 Mkln1-003 31489394-31512028 protein_coding
  ENSMUST00000133182 Mkln1-008 31398836-31419436 retained_intron
  ENSMUST00000134315 Mkln1-004 31398828-31470889 retained_intron
  ENSMUST00000134544 Mkln1-006 31398845-31444150 retained_intron
  ENSMUST00000137621 Mkln1-007 31398829-31436017 retained_intron
  ENSMUST00000141045 Mkln1-011 31468120-31492693 processed_transcript
  ENSMUST00000142469 Mkln1-002 31496766-31507965 processed_transcript
  ENSMUST00000147614 Mkln1-009 31430716-31474376 processed_transcript
  ENSMUST00000149859 Mkln1-012 31492621-31507847 processed_transcript
  ENSMUST00000150949 Mkln1-005 31430682-31489411 processed_transcript
  ENSMUST00000154954 Mkln1-010 31398859-31433131 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026699ENSMUST00000130108ENSMUST00000133182ENSMUST00000134544ENSMUST00000137621ENSMUST00000141045ENSMUST00000142469ENSMUST00000149859ENSMUST00000150949ENSMUST00000154954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026699 3.035±0.85 1.600±0.29 4.778±0.26 7.371±0.93 2.866±0.21 1.598±0.42 1.965±0.14 3.290±0.31 2.177±0.70 4.486±0.36 3.740±0.68 2.409±0.47 1.921±1.15 1.290±0.57
ENSMUST00000130108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.662±1.00 1.656±0.00 N/A
ENSMUST00000133182 N/A 89.253±19.22 N/A N/A N/A 17.416±2.81 N/A N/A 37.200±10.92 N/A N/A 21.256±0.29 N/A N/A
ENSMUST00000134544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.276±0.51 N/A N/A
ENSMUST00000137621 N/A N/A N/A N/A N/A 4.607±0.49 N/A N/A N/A N/A N/A 6.356±2.00 N/A N/A
ENSMUST00000141045 N/A N/A N/A 29.231±0.00 N/A N/A N/A N/A N/A N/A N/A 40.183±7.23 37.549±14.23 11.603±0.00
ENSMUST00000142469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.849±0.00
ENSMUST00000149859 N/A N/A N/A N/A 32.720±0.00 N/A N/A N/A N/A N/A N/A 35.227±0.00 38.323±7.89 20.965±0.00
ENSMUST00000150949 11.458±0.61 N/A 15.476±2.16 24.051±0.00 12.402±3.92 5.353±0.54 11.055±1.78 13.307±1.28 10.744±5.27 14.689±0.00 17.131±1.16 15.509±10.15 22.638±6.59 12.484±2.19
ENSMUST00000154954 26.823±7.71 26.635±2.98 N/A N/A 35.168±6.57 19.242±3.22 21.614±0.82 37.283±4.50 25.876±2.08 40.389±4.31 N/A 20.936±2.42 25.112±5.13 17.927±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GU CIL_0002GU_0002 CGP 6:30956023-31516811
CIL_00024O CIL_00024O_0003 CGP 6:31398735-31563981

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025576 mkln1 muskelin 1, intracellular mediator containing kelch motifs protein_coding Danio_rerio
ENSG00000128585 MKLN1 muskelin 1, intracellular mediator containing kelch motifs protein_coding Homo_sapiens

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