C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi to ER traffic protein 4 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025858 Get4 10090 + 5:139252324-139270051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026976 Get4-001 139252324-139270051 protein_coding
  ENSMUST00000110878 Get4-002 139253511-139269329 protein_coding
  ENSMUST00000124420 Get4-006 139266931-139269702 retained_intron
  ENSMUST00000130326 Get4-003 139252370-139267141 protein_coding
  ENSMUST00000138059 Get4-005 139266867-139267438 retained_intron
  ENSMUST00000138508 Get4-004 139253497-139267234 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026976ENSMUST00000110878ENSMUST00000124420ENSMUST00000130326ENSMUST00000138508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026976 23.832±3.42 43.930±6.64 32.646±5.46 21.109±11.09 20.063±7.22 20.581±2.95 17.874±2.15 22.152±1.58 17.143±9.34 29.436±2.24 12.124±1.33 36.033±15.95 17.150±9.27 18.668±8.85
ENSMUST00000110878 7.014±0.00 30.887±0.00 N/A N/A N/A 14.367±1.29 N/A N/A 16.453±10.53 N/A 9.316±1.69 9.104±2.39 28.710±15.84 20.075±7.63
ENSMUST00000124420 10.152±2.43 N/A 16.166±2.07 11.829±1.17 11.887±0.95 14.980±1.06 5.788±0.00 N/A 7.278±2.58 15.174±3.39 N/A 23.125±0.98 N/A 1.944±0.00
ENSMUST00000130326 33.801±15.71 199.387±45.35 N/A N/A 34.645±15.80 55.714±13.73 11.264±0.43 28.581±4.23 19.741±3.53 37.701±20.88 N/A 148.938±44.23 27.855±2.87 50.998±9.53
ENSMUST00000138508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.747±2.59 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018J CIL_00018J_0002 CGP 5:139200637-139270051
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_000186 CIL_000186_0002 CGP 5:139252324-139325622

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005829 ISS cytosol
GO:0006810 IEA transport
GO:0071816 ISS tail-anchored membrane protein insertion into ER membrane
GO:0071818 ISS BAT3 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024398 get4 golgi to ER traffic protein 4 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000239857 GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae) protein_coding Homo_sapiens

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