C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1500015O10 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026051 1500015O10Rik 10090 + 1:43730602-43742578 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027217 1500015O10Rik-001 43730602-43742578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027217 0.855±0.25 22.443±1.85 1.811±0.34 4.643±1.14 0.921±0.40 0.244±0.08 1.299±0.55 0.574±0.25 0.211±0.11 0.544±0.13 1.003±0.41 24.338±11.93 0.830±0.73 0.377±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y7 CIL_0003Y7_0002 CGP 1:43444579-43742578
CIL_0003Y8 CIL_0003Y8_0002 CGP 1:43730602-43827800

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IDA extracellular space
GO:0008054 IDA cyclin catabolic process
GO:0031410 IEA cytoplasmic vesicle
GO:0070314 IDA G1 to G0 transition
GO:0090398 IDA cellular senescence

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056087 C9H2orf40 (1 of 2) chromosome 2 open reading frame 40 protein_coding Danio_rerio
ENSDARG00000088717 C6H2orf40 (2 of 2) chromosome 2 open reading frame 40 protein_coding Danio_rerio
ENSG00000119147 C2orf40 chromosome 2 open reading frame 40 protein_coding Homo_sapiens

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