C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: KH domain containing, RNA binding, signal transduction associated 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026058 Khdrbs2 10090 + 1:32172720-32658564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027226 Khdrbs2-001 32172720-32658564 protein_coding
  ENSMUST00000185666 Khdrbs2-004 32172887-32311090 protein_coding
  ENSMUST00000186984 Khdrbs2-005 32315015-32414934 processed_transcript
  ENSMUST00000188257 Khdrbs2-003 32172748-32338354 protein_coding
  ENSMUST00000189878 Khdrbs2-002 32172729-32246878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000027226ENSMUST00000186984ENSMUST00000188257ENSMUST00000189878
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000027226 0.024±0.00 0.198±0.08 0.014±0.01 9.627±6.90 0.206±0.10 N/A 0.021±0.02 N/A 0.337±0.24 0.075±0.04 0.048±0.03
ENSMUST00000186984 0.394±0.00 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A 1.709±0.00
ENSMUST00000188257 N/A N/A N/A N/A N/A N/A 0.008±0.01 N/A N/A N/A N/A
ENSMUST00000189878 N/A 0.210±0.00 0.019±0.00 1.100±0.65 0.088±0.03 0.027±0.01 0.006±0.00 0.005±0.00 0.133±0.10 0.035±0.02 0.036±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IEA protein binding
GO:0005634 TAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008143 IDA poly(A) binding
GO:0008266 IDA poly(U) RNA binding
GO:0009967 TAS positive regulation of signal transduction
GO:0017124 IDA SH3 domain binding
GO:0042169 IDA SH2 domain binding
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069469 khdrbs2 KH domain containing, RNA binding, signal transduction associated 2 protein_coding Danio_rerio
ENSG00000112232 KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2 protein_coding Homo_sapiens

Loading