C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dystonin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026131 Dst 10090 + 1:33908225-34308661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097785 Dst-001 34011825-34308661 protein_coding
  ENSMUST00000097786 Dst-002 34011822-34308661 protein_coding
  ENSMUST00000115104 Dst-201 34011825-34308650 protein_coding
  ENSMUST00000182018 Dst-009 34257836-34308404 protein_coding
  ENSMUST00000182314 Dst-006 34006126-34137136 retained_intron
  ENSMUST00000182335 Dst-012 34161924-34165401 retained_intron
  ENSMUST00000182410 Dst-013 34089292-34119153 retained_intron
  ENSMUST00000182507 Dst-011 34294446-34306651 protein_coding
  ENSMUST00000182513 Dst-004 33908225-34183904 protein_coding
  ENSMUST00000182697 Dst-005 34005882-34137134 retained_intron
  ENSMUST00000183006 Dst-014 34121476-34164237 processed_transcript
  ENSMUST00000183034 Dst-007 33908252-34308654 protein_coding
  ENSMUST00000183100 Dst-010 34293455-34303463 protein_coding
  ENSMUST00000183302 Dst-003 34160253-34183904 protein_coding
  ENSMUST00000183331 Dst-019 34006180-34164700 retained_intron
  ENSMUST00000185269 Dst-015 34160330-34308404 protein_coding
  ENSMUST00000185736 Dst-020 34270570-34272292 retained_intron
  ENSMUST00000185897 Dst-016 34160330-34193263 protein_coding
  ENSMUST00000187486 Dst-018 34005880-34174795 protein_coding
  ENSMUST00000189952 Dst-021 34178906-34183247 retained_intron
  ENSMUST00000190163 Dst-017 34160253-34174946 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097785ENSMUST00000097786ENSMUST00000182018ENSMUST00000183034ENSMUST00000183100ENSMUST00000183302ENSMUST00000185269
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097785 N/A 0.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.944±0.00 N/A N/A N/A
ENSMUST00000097786 N/A 1.852±0.00 N/A 9.411±7.43 N/A 2.778±0.43 N/A N/A N/A N/A 3.409±0.00 N/A N/A N/A
ENSMUST00000182018 24.333±5.20 11.650±1.93 29.039±5.73 20.301±14.45 12.151±3.38 20.852±1.86 22.765±4.68 18.672±3.51 4.178±1.12 17.301±0.79 34.142±8.47 17.570±3.54 28.565±10.27 8.908±1.54
ENSMUST00000183034 1.601±0.13 N/A 2.964±0.00 N/A 0.908±0.00 N/A 3.526±0.77 N/A N/A 1.543±0.26 6.271±1.54 N/A 2.253±1.00 N/A
ENSMUST00000183100 N/A 37.145±3.24 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183302 N/A N/A 6.950±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185269 2.332±0.07 1.662±0.29 7.045±0.00 9.582±7.78 2.809±0.27 2.400±0.09 2.507±0.34 5.491±0.60 0.895±0.26 2.647±0.71 5.950±1.90 4.516±2.99 9.816±5.93 2.642±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087X CIL_00087X_0002 VISTA 1:33689736-34292240

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0003779 IEA actin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 ISS cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005882 IEA intermediate filament
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007050 IEA cell cycle arrest
GO:0007155 IEA cell adhesion
GO:0007409 IMP axonogenesis
GO:0008017 IDA microtubule binding
GO:0008090 IMP retrograde axon cargo transport
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0014704 IDA intercalated disc
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016023 ISO cytoplasmic membrane-bounded vesicle
GO:0030018 IDA Z disc
GO:0030056 IDA hemidesmosome
GO:0031110 IMP regulation of microtubule polymerization or depolymerization
GO:0031122 IMP cytoplasmic microtubule organization
GO:0031673 IDA H zone
GO:0035371 ISS microtubule plus-end
GO:0042383 IDA sarcolemma
GO:0042803 IDA protein homodimerization activity
GO:0042995 IEA cell projection
GO:0045104 ISS intermediate filament cytoskeleton organization
GO:0046907 IDA intracellular transport
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051010 ISS microtubule plus-end binding
GO:0060053 IDA neurofilament cytoskeleton
GO:0097038 IDA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024748 DST dystonin protein_coding Danio_rerio

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