C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: galactosidase, beta 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026200 Glb1l 10090 - 1:75198236-75210813 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113623 Glb1l-001 75199347-75210778 protein_coding
  ENSMUST00000131408 Glb1l-003 75208031-75210753 retained_intron
  ENSMUST00000132507 Glb1l-004 75199829-75209494 retained_intron
  ENSMUST00000143193 Glb1l-007 75200093-75201248 retained_intron
  ENSMUST00000146713 Glb1l-005 75200952-75202295 retained_intron
  ENSMUST00000153584 Glb1l-006 75201206-75201823 retained_intron
  ENSMUST00000155716 Glb1l-002 75198243-75210778 nonsense_mediated_decay
  ENSMUST00000185448 Glb1l-011 75202719-75210813 protein_coding
  ENSMUST00000185449 Glb1l-010 75199091-75201172 retained_intron
  ENSMUST00000186148 Glb1l-012 75198236-75199108 processed_transcript
  ENSMUST00000186173 Glb1l-008 75199491-75209423 protein_coding
  ENSMUST00000189663 Glb1l-009 75199491-75202890 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyOvaryTestisENSMUST00000113623ENSMUST00000143193ENSMUST00000155716
Transcript ID Bladder Breast Kidney Ovary Testis
ENSMUST00000113623 N/A N/A 35.162±0.85 N/A N/A
ENSMUST00000143193 N/A N/A N/A N/A 81.786±0.00
ENSMUST00000155716 16.686±1.14 13.085±0.00 N/A 12.570±4.00 12.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006EI CIL_0006EI_0002 CGP 1:75180860-75199387
CIL_000416 CIL_000416_0003 CGP 1:75192151-75210813
CIL_0006EH CIL_0006EH_0002 CGP 1:75198236-75215606

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004565 IEA beta-galactosidase activity
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0005975 IEA carbohydrate metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029955 glb1l galactosidase, beta 1-like protein_coding Danio_rerio
ENSG00000163521 GLB1L galactosidase, beta 1-like protein_coding Homo_sapiens

Loading