C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/threonine kinase 11 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026213 Stk11ip 10090 + 1:75521529-75537335 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027414 Stk11ip-001 75521529-75537335 protein_coding
  ENSMUST00000113553 Stk11ip-004 75521552-75536932 protein_coding
  ENSMUST00000129652 Stk11ip-005 75521811-75527112 retained_intron
  ENSMUST00000129794 Stk11ip-009 75528305-75529483 retained_intron
  ENSMUST00000140963 Stk11ip-002 75521791-75536935 retained_intron
  ENSMUST00000146575 Stk11ip-007 75532531-75534253 retained_intron
  ENSMUST00000150560 Stk11ip-008 75533038-75533784 processed_transcript
  ENSMUST00000154303 Stk11ip-006 75529674-75532337 retained_intron
  ENSMUST00000156838 Stk11ip-003 75528640-75536935 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027414ENSMUST00000113553ENSMUST00000129794ENSMUST00000140963ENSMUST00000156838
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027414 N/A N/A 0.799±0.00 N/A N/A N/A N/A 0.689±0.05 0.686±0.22 N/A 0.542±0.06 N/A 1.645±0.54 N/A
ENSMUST00000113553 4.965±1.92 6.853±1.24 3.359±0.59 5.594±2.32 8.856±1.17 6.672±1.12 2.324±0.79 4.632±1.07 2.374±0.79 8.927±0.85 2.157±0.52 10.723±4.63 5.550±2.00 5.492±0.41
ENSMUST00000129794 N/A N/A N/A 9.158±0.00 N/A N/A N/A N/A N/A N/A N/A 26.739±0.00 17.555±2.46 42.526±0.00
ENSMUST00000140963 2.935±0.38 4.580±1.09 1.786±0.22 2.122±1.06 3.422±0.96 2.207±0.32 0.756±0.36 1.419±0.54 0.805±0.32 4.192±0.00 0.732±0.20 4.880±1.27 2.592±1.99 2.492±0.89
ENSMUST00000156838 N/A N/A 2.766±0.00 1.958±0.66 N/A N/A N/A N/A 0.692±0.00 2.425±0.00 0.847±0.06 2.615±0.71 0.988±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_00082R CIL_00082R_0002 VISTA 1:75469003-76073592
CIL_0006O2 CIL_0006O2_0002 CGP 1:75507077-75537335
CIL_0006O3 CIL_0006O3_0002 CGP 1:75521529-75562172

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0008104 IEA protein localization
GO:0019901 IEA protein kinase binding
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070122 stk11ip serine/threonine kinase 11 interacting protein protein_coding Danio_rerio
ENSG00000144589 STK11IP serine/threonine kinase 11 interacting protein protein_coding Homo_sapiens

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