C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3110009E18 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026388 3110009E18Rik 10090 + 1:120121187-120188189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027637 3110009E18Rik-003 120121187-120188189 protein_coding
  ENSMUST00000056038 3110009E18Rik-002 120121200-120188189 protein_coding
  ENSMUST00000112644 3110009E18Rik-001 120121195-120188189 protein_coding
  ENSMUST00000128578 3110009E18Rik-005 120160480-120173566 processed_transcript
  ENSMUST00000153037 3110009E18Rik-004 120150671-120169511 protein_coding
  ENSMUST00000187809 3110009E18Rik-006 120150599-120165459 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027637ENSMUST00000056038ENSMUST00000112644ENSMUST00000128578ENSMUST00000153037ENSMUST00000187809
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027637 N/A N/A 0.295±0.02 0.137±0.00 0.166±0.00 0.092±0.00 N/A 0.197±0.00 N/A N/A 0.152±0.04 0.207±0.00 N/A 1.186±0.43
ENSMUST00000056038 N/A 0.740±0.43 1.946±0.00 1.202±0.27 N/A N/A 1.115±0.42 1.778±0.90 0.848±0.30 0.394±0.00 0.508±0.18 1.312±0.00 1.458±0.00 N/A
ENSMUST00000112644 2.313±0.11 N/A 3.804±0.05 2.744±0.57 1.572±0.57 1.004±0.48 1.484±0.96 3.077±1.33 2.349±1.55 1.090±0.47 1.152±0.57 2.470±2.03 5.591±1.45 4.964±3.40
ENSMUST00000128578 N/A N/A N/A N/A 0.237±0.00 N/A N/A N/A N/A 0.202±0.09 N/A N/A N/A N/A
ENSMUST00000153037 0.228±0.00 0.199±0.07 N/A N/A 0.226±0.00 N/A N/A N/A 0.210±0.08 N/A 0.149±0.00 0.369±0.11 N/A N/A
ENSMUST00000187809 0.771±0.00 0.645±0.29 N/A N/A 0.351±0.00 N/A N/A N/A N/A N/A N/A 1.239±0.00 0.786±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093M CIL_00093M_0002 VISTA 1:119723864-120325096

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037199 C9H2orf76 chromosome 2 open reading frame 76 protein_coding Danio_rerio
ENSG00000186132 C2orf76 chromosome 2 open reading frame 76 protein_coding Homo_sapiens

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