C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: troponin I, skeletal, slow 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026418 Tnni1 10090 + 1:135779434-135810989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000129217 Tnni1-008 135805057-135809909 protein_coding
  ENSMUST00000132795 Tnni1-005 135783065-135805622 protein_coding
  ENSMUST00000137331 Tnni1-006 135799421-135810634 processed_transcript
  ENSMUST00000139986 Tnni1-007 135799519-135809735 protein_coding
  ENSMUST00000148201 Tnni1-002 135799833-135810989 protein_coding
  ENSMUST00000152075 Tnni1-003 135799421-135810989 protein_coding
  ENSMUST00000152208 Tnni1-001 135799402-135810989 protein_coding
  ENSMUST00000154463 Tnni1-004 135799511-135810700 protein_coding
  ENSMUST00000187830 Tnni1-009 135779434-135785100 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129217ENSMUST00000132795ENSMUST00000137331ENSMUST00000139986ENSMUST00000152075ENSMUST00000152208ENSMUST00000154463ENSMUST00000187830
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129217 N/A 0.177±0.09 N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A 0.905±0.00 0.437±0.00 N/A
ENSMUST00000132795 0.156±0.00 0.169±0.06 0.337±0.00 0.130±0.00 0.189±0.00 N/A N/A N/A N/A 0.263±0.00 N/A 0.771±0.34 N/A N/A
ENSMUST00000137331 0.065±0.00 N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A 0.731±0.00 N/A 0.602±0.00
ENSMUST00000139986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.284±0.00 0.302±0.00 N/A
ENSMUST00000152075 0.037±0.00 0.046±0.00 0.246±0.00 N/A 0.715±0.00 25.275±3.89 N/A 0.032±0.00 0.076±0.04 0.208±0.14 N/A 0.233±0.00 0.327±0.09 0.266±0.00
ENSMUST00000152208 N/A N/A 0.323±0.00 1.021±0.13 0.820±0.61 N/A 0.659±0.16 2.583±0.09 2.916±4.44 0.336±0.00 115.236±72.86 0.733±0.35 4.770±4.47 0.418±0.08
ENSMUST00000154463 N/A N/A 0.266±0.08 0.163±0.00 N/A N/A 0.279±0.00 N/A N/A N/A N/A 0.488±0.18 0.816±0.46 N/A
ENSMUST00000187830 0.029±0.00 N/A 0.038±0.00 0.008±0.00 0.056±0.00 N/A N/A N/A N/A 0.037±0.00 N/A 0.030±0.02 N/A 0.066±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005861 IEA troponin complex
GO:0046872 IEA metal ion binding
GO:0055010 IMP ventricular cardiac muscle tissue morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000474 tnni1a troponin I, skeletal, slow a protein_coding Danio_rerio
ENSDARG00000052708 tnni1b troponin I, skeletal, slow b protein_coding Danio_rerio
ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) protein_coding Homo_sapiens

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