C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCY1-like 3 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026584 Scyl3 10090 + 1:163929100-163955126 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027876 Scyl3-001 163929765-163955126 protein_coding
  ENSMUST00000159516 Scyl3-005 163941115-163955114 protein_coding
  ENSMUST00000161908 Scyl3-003 163929100-163954702 protein_coding
  ENSMUST00000162234 Scyl3-002 163929805-163955109 nonsense_mediated_decay
  ENSMUST00000162920 Scyl3-006 163951213-163953802 retained_intron
  ENSMUST00000163033 Scyl3-004 163943771-163944844 processed_transcript
  ENSMUST00000170359 Scyl3-201 163929790-163955110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027876ENSMUST00000161908ENSMUST00000162234ENSMUST00000162920ENSMUST00000170359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027876 1.892±0.81 N/A 3.641±0.11 4.568±0.73 0.948±0.00 1.212±0.00 0.235±0.00 0.915±0.17 3.306±1.30 0.608±0.00 0.709±0.33 2.172±0.76 4.176±0.68 2.011±0.62
ENSMUST00000161908 1.763±0.51 1.403±0.15 N/A N/A 1.931±0.44 1.678±0.16 0.457±0.22 1.652±0.58 1.811±0.31 1.785±0.31 N/A 2.543±1.07 N/A 1.749±0.30
ENSMUST00000162234 0.562±0.00 N/A N/A 1.935±0.00 1.575±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.924±0.00
ENSMUST00000162920 N/A 2.913±0.00 N/A 2.452±0.00 N/A 4.338±0.00 N/A 2.008±0.00 2.114±0.00 2.600±0.00 0.591±0.01 3.162±0.88 5.468±0.26 2.126±0.00
ENSMUST00000170359 N/A 1.707±0.54 N/A N/A 2.466±0.98 2.912±1.27 0.251±0.00 1.796±0.86 0.854±0.05 0.968±0.00 0.472±0.09 2.133±1.05 2.206±0.00 1.931±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093H CIL_00093H_0002 VISTA 1:163597221-164199818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0008150 ND biological_process
GO:0030027 IEA lamellipodium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027046 scyl3 SCY1-like 3 (S. cerevisiae) protein_coding Danio_rerio
ENSG00000000457 SCYL3 SCY1-like 3 (S. cerevisiae) protein_coding Homo_sapiens

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