C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GEF with PH domain and SH3 binding motif 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026594 Ralgps2 10090 - 1:156804166-156939626 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027886 Ralgps2-007 156806760-156939543 protein_coding
  ENSMUST00000063199 Ralgps2-008 156808116-156939531 protein_coding
  ENSMUST00000171292 Ralgps2-009 156807710-156939387 protein_coding
  ENSMUST00000172057 Ralgps2-001 156804166-156939602 protein_coding
  ENSMUST00000185198 Ralgps2-005 156813081-156939626 protein_coding
  ENSMUST00000185970 Ralgps2-015 156828552-156832691 retained_intron
  ENSMUST00000188656 Ralgps2-010 156818896-156938818 protein_coding
  ENSMUST00000189208 Ralgps2-012 156808830-156813568 retained_intron
  ENSMUST00000189316 Ralgps2-006 156816524-156939567 protein_coding
  ENSMUST00000189648 Ralgps2-014 156900598-156938781 protein_coding
  ENSMUST00000190648 Ralgps2-003 156818877-156939593 protein_coding
  ENSMUST00000190762 Ralgps2-013 156887093-156939134 protein_coding
  ENSMUST00000191503 Ralgps2-011 156828498-156830847 retained_intron
  ENSMUST00000191605 Ralgps2-004 156808122-156939608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027886ENSMUST00000063199ENSMUST00000171292ENSMUST00000172057ENSMUST00000185198ENSMUST00000185970ENSMUST00000189208ENSMUST00000189648ENSMUST00000190648ENSMUST00000191605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027886 N/A N/A N/A 1.361±0.00 N/A N/A N/A 1.039±0.00 N/A 0.058±0.00 2.778±0.00 2.409±0.67 N/A
ENSMUST00000063199 N/A N/A N/A N/A N/A N/A N/A 0.891±0.00 N/A 0.366±0.00 N/A 4.745±2.46 16.480±0.00
ENSMUST00000171292 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A
ENSMUST00000172057 0.289±0.00 0.615±0.14 1.263±0.00 3.130±0.66 1.932±1.13 2.523±0.60 0.914±0.36 1.685±0.53 1.795±0.16 0.080±0.03 2.201±0.85 1.129±0.18 3.572±0.00
ENSMUST00000185198 N/A N/A N/A N/A 3.119±1.26 4.179±0.00 1.098±0.00 0.842±0.00 1.533±0.19 N/A 2.717±0.61 N/A 38.032±3.08
ENSMUST00000185970 N/A 6.171±0.86 N/A N/A N/A N/A N/A N/A N/A N/A 13.137±3.80 N/A N/A
ENSMUST00000189208 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A
ENSMUST00000189648 N/A N/A N/A 38.149±0.00 N/A N/A N/A N/A N/A N/A 90.535±0.00 79.891±3.25 533.132±0.00
ENSMUST00000190648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.697±0.00 N/A N/A
ENSMUST00000191605 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.01 N/A 4.591±0.52 13.597±2.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000656 CIL_000656_0002 CGP 1:156678532-156939626
CIL_0001WH CIL_0001WH_0003 CGP 1:156804166-156939626

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026519 ralgps2 Ral-A exchange factor RalGPS2 protein_coding Danio_rerio
ENSG00000116191 RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 protein_coding Homo_sapiens

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