C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700009P17 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026649 1700009P17Rik 10090 + 1:171113918-171126967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027959 1700009P17Rik-001 171121661-171126967 protein_coding
  ENSMUST00000124157 1700009P17Rik-007 171125034-171126659 protein_coding
  ENSMUST00000127394 1700009P17Rik-005 171122677-171126036 protein_coding
  ENSMUST00000129651 1700009P17Rik-002 171113918-171126829 protein_coding
  ENSMUST00000143623 1700009P17Rik-006 171123150-171126942 nonsense_mediated_decay
  ENSMUST00000148200 1700009P17Rik-004 171121664-171123156 processed_transcript
  ENSMUST00000151340 1700009P17Rik-003 171113989-171126779 protein_coding
  ENSMUST00000156789 1700009P17Rik-008 171123174-171126080 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027959ENSMUST00000129651ENSMUST00000143623ENSMUST00000151340
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027959 1.099±0.16 0.310±0.09 1.735±0.49 0.657±0.01 0.773±0.24 0.219±0.00 0.893±0.54 1.627±0.61 0.442±0.16 9.656±0.47 0.365±0.14 6.507±2.50 0.722±0.35 99.713±34.28
ENSMUST00000129651 0.725±0.07 0.805±0.27 0.920±0.00 0.324±0.00 0.703±0.25 0.520±0.27 0.699±0.00 2.902±0.32 0.739±0.36 N/A 0.447±0.32 2.086±0.16 0.701±0.21 N/A
ENSMUST00000143623 N/A 0.210±0.00 1.280±0.00 0.869±0.08 1.098±0.39 0.197±0.04 N/A 0.913±0.00 0.289±0.06 N/A 0.528±0.18 5.525±4.38 0.312±0.10 N/A
ENSMUST00000151340 0.902±0.26 0.859±0.56 2.355±0.88 3.204±0.80 1.085±0.45 0.370±0.27 0.656±0.04 1.506±0.57 0.617±0.32 6.124±2.20 0.427±0.04 4.746±2.31 1.265±0.31 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070868 C23H1orf192 cilia and flagella associated protein 126 protein_coding Danio_rerio
ENSG00000188931 C1orf192 cilia and flagella associated protein 126 protein_coding Homo_sapiens

Loading