C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026663 Atf6 10090 - 1:170704674-170867771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027974 Atf6-001 170704674-170867771 protein_coding
  ENSMUST00000182787 Atf6-002 170792287-170794371 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027974
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027974 8.504±1.25 12.813±1.89 5.870±1.26 5.005±0.24 8.849±1.14 9.724±0.41 10.747±2.55 8.640±1.70 8.310±2.75 11.852±2.45 3.761±0.68 13.511±3.34 7.397±3.26 3.374±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MK CIL_0005MK_0002 CGP 1:170644532-170867771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006986 IEA response to unfolded protein
GO:0016021 IEA integral component of membrane
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012656 atf6 activating transcription factor 6 protein_coding Danio_rerio
ENSG00000118217 ATF6 activating transcription factor 6 protein_coding Homo_sapiens

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