C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026683 Nuf2 10090 - 1:169497934-169531464 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028000 Nuf2-201 169498312-169531428 protein_coding
  ENSMUST00000111368 Nuf2-202 169497934-169531464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028000ENSMUST00000111368
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028000 0.674±0.64 0.256±0.03 0.537±0.04 3.506±2.35 0.321±0.10 1.116±0.32 0.150±0.00 0.175±0.07 14.353±9.03 0.168±0.04 0.064±0.07 2.241±2.56 10.874±10.31 10.895±2.13
ENSMUST00000111368 0.110±0.00 0.169±0.02 0.056±0.00 0.727±0.00 0.128±0.03 0.183±0.00 0.067±0.03 N/A 2.091±0.96 0.160±0.00 N/A 0.562±0.29 1.480±1.23 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BK CIL_0009BK_0002 VISTA 1:169043699-169645191
CIL_0008AF CIL_0008AF_0002 VISTA 1:169085394-169686297
CIL_0009CL CIL_0009CL_0002 VISTA 1:169176672-169778007

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0007067 IEA mitotic nuclear division
GO:0016020 IEA membrane
GO:0031262 ISS Ndc80 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034624 nuf2 NUF2, NDC80 kinetochore complex component, homolog protein_coding Danio_rerio
ENSG00000143228 NUF2 NUF2, NDC80 kinetochore complex component protein_coding Homo_sapiens

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