C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: methyltransferase like 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026694 Mettl13 10090 - 1:162532127-162548551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028017 Mettl13-001 162532127-162548551 protein_coding
  ENSMUST00000159255 Mettl13-002 162541449-162548538 retained_intron
  ENSMUST00000159316 Mettl13-006 162538920-162546527 nonsense_mediated_decay
  ENSMUST00000159817 Mettl13-005 162533679-162548522 nonsense_mediated_decay
  ENSMUST00000161760 Mettl13-003 162543636-162548528 retained_intron
  ENSMUST00000176220 Mettl13-007 162535842-162544362 protein_coding
  ENSMUST00000176689 Mettl13-008 162537143-162548256 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028017ENSMUST00000159255ENSMUST00000159316ENSMUST00000159817ENSMUST00000161760
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028017 1.912±0.62 2.593±0.37 2.177±0.14 1.852±0.48 1.948±0.28 1.289±0.21 0.752±0.13 1.438±0.19 1.884±0.47 1.912±0.35 1.676±0.27 3.017±1.30 1.379±0.37 0.657±0.09
ENSMUST00000159255 0.616±0.00 0.684±0.06 N/A N/A 0.570±0.00 0.502±0.00 0.239±0.00 N/A N/A 0.440±0.14 N/A 0.541±0.00 N/A N/A
ENSMUST00000159316 N/A N/A N/A N/A N/A N/A N/A N/A 2.099±0.00 N/A N/A 6.046±2.69 19.215±0.00 3.713±0.00
ENSMUST00000159817 1.661±0.53 N/A 1.621±0.03 2.901±1.01 1.557±0.17 0.895±0.21 0.580±0.06 1.370±0.32 2.225±1.25 0.892±0.36 1.156±0.33 3.578±1.99 5.036±3.75 1.060±0.30
ENSMUST00000161760 0.849±0.03 0.680±0.00 N/A 0.847±0.00 0.646±0.03 0.424±0.08 N/A N/A 0.469±0.07 0.384±0.00 N/A 1.207±0.18 N/A 0.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0002 VISTA 1:162530457-163133967

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010905 mettl13 methyltransferase like 13 protein_coding Danio_rerio
ENSG00000010165 METTL13 methyltransferase like 13 protein_coding Homo_sapiens

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