C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arrestin domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026972 Arrdc1 10090 - 2:24925352-24935252 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028349 Arrdc1-001 24925352-24935252 protein_coding
  ENSMUST00000102935 Arrdc1-002 24925352-24935163 protein_coding
  ENSMUST00000129784 Arrdc1-007 24926055-24935145 retained_intron
  ENSMUST00000132074 Arrdc1-011 24926912-24935054 protein_coding
  ENSMUST00000133396 Arrdc1-004 24927284-24935188 retained_intron
  ENSMUST00000133934 Arrdc1-005 24926323-24935174 protein_coding
  ENSMUST00000142887 Arrdc1-008 24926158-24935142 nonsense_mediated_decay
  ENSMUST00000144963 Arrdc1-006 24925989-24935167 nonsense_mediated_decay
  ENSMUST00000152240 Arrdc1-012 24926183-24927200 retained_intron
  ENSMUST00000155525 Arrdc1-010 24926672-24927903 processed_transcript
  ENSMUST00000155953 Arrdc1-003 24925355-24935145 retained_intron
  ENSMUST00000156706 Arrdc1-009 24926995-24928131 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028349ENSMUST00000102935ENSMUST00000133934ENSMUST00000152240ENSMUST00000155953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028349 11.237±3.02 12.568±1.85 17.641±7.86 7.247±1.08 31.239±12.66 72.440±6.25 2.575±1.05 17.650±3.00 5.844±4.42 47.210±2.46 1.031±0.32 23.985±9.80 4.956±2.58 2.351±0.83
ENSMUST00000102935 N/A N/A N/A N/A N/A 19.500±0.00 1.579±0.00 4.904±0.72 1.387±0.65 N/A 0.676±0.16 6.025±2.15 1.059±0.00 0.731±0.00
ENSMUST00000133934 N/A N/A N/A 15.288±0.00 N/A N/A N/A N/A N/A N/A 1.380±0.00 35.906±0.00 13.196±1.63 1.420±0.00
ENSMUST00000152240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.619±0.01 N/A N/A N/A
ENSMUST00000155953 3.356±0.00 4.796±1.37 N/A 3.419±0.00 26.420±6.83 38.408±9.74 N/A 6.168±1.64 2.356±1.76 29.402±5.55 0.314±0.00 10.709±3.03 1.274±0.00 0.792±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QG CIL_0000QG_0003 CGP 2:24790769-24935252

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0031410 IEA cytoplasmic vesicle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068148 arrdc1a arrestin domain containing 1a protein_coding Danio_rerio
ENSDARG00000079839 arrdc1b arrestin domain containing 1b protein_coding Danio_rerio
ENSG00000197070 ARRDC1 arrestin domain containing 1 protein_coding Homo_sapiens

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