C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: harbinger transposase derived 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027243 Harbi1 10090 + 2:91710852-91721545 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090608 Harbi1-001 91710922-91721545 protein_coding
  ENSMUST00000111322 Harbi1-002 91712195-91719287 protein_coding
  ENSMUST00000128140 Harbi1-005 91710852-91712327 protein_coding
  ENSMUST00000140183 Harbi1-004 91710853-91712725 protein_coding
  ENSMUST00000142692 Harbi1-003 91710917-91715430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090608ENSMUST00000111322ENSMUST00000128140ENSMUST00000140183ENSMUST00000142692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090608 2.201±0.95 1.617±0.85 2.148±0.68 1.218±0.50 1.520±0.29 2.220±0.41 0.871±0.32 2.770±0.45 3.164±1.05 1.989±0.50 1.970±0.21 2.509±0.40 1.920±0.32 1.494±0.74
ENSMUST00000111322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.404±0.00 N/A
ENSMUST00000128140 N/A N/A N/A 6.138±0.00 N/A N/A N/A N/A N/A N/A N/A 18.382±0.00 8.178±0.32 5.464±0.00
ENSMUST00000140183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.119±0.00 N/A 2.709±0.00 N/A
ENSMUST00000142692 N/A 0.326±0.00 N/A 0.202±0.11 0.179±0.01 0.271±0.00 N/A N/A 0.341±0.04 0.201±0.04 N/A 0.238±0.06 0.398±0.30 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000181 CIL_000181_0002 CGP 2:91674618-91721545

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004518 IEA nuclease activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036038 harbi1 harbinger transposase derived 1 protein_coding Danio_rerio
ENSG00000180423 HARBI1 harbinger transposase derived 1 protein_coding Homo_sapiens

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