C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027303 Ptpra 10090 + 2:130450278-130554026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028769 Ptpra-001 130450278-130554026 protein_coding
  ENSMUST00000077303 Ptpra-002 130450544-130554023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028769 26.364±11.31 66.628±29.88 34.438±2.55 44.216±11.16 29.291±17.70 37.567±9.33 7.131±3.66 17.233±6.65 11.184±2.93 39.561±8.13 3.477±0.45 59.236±25.78 35.134±13.73 4.470±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_00006B CIL_00006B_0002 CGP 2:130424339-130554026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0006468 IDA protein phosphorylation
GO:0008286 IMP insulin receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0043235 ISO receptor complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001769 ptpra protein tyrosine phosphatase, receptor type, A protein_coding Danio_rerio
ENSG00000132670 PTPRA protein tyrosine phosphatase, receptor type, A protein_coding Homo_sapiens

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