| Transcript ID | Brain | Lung | Ovary | Testis |
|---|---|---|---|---|
| ENSMUST00000029222 | 7.946±1.33 | 2.871±0.00 | 6.599±0.94 | 34.549±5.29 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | coiled-coil domain containing 39 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSMUSG00000027676  |
Ccdc39 | 10090 | - |
3:33812362-33844310  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSMUST00000029222 |
Ccdc39-001 | 33812362-33844301 | protein_coding | ||
| ENSMUST00000125845 |
Ccdc39-003 | 33818648-33844301 | retained_intron | ||
| ENSMUST00000127844 |
Ccdc39-004 | 33820187-33844075 | processed_transcript | ||
| ENSMUST00000135728 |
Ccdc39-002 | 33837994-33844310 | retained_intron | ||
| ENSMUST00000154577 |
Ccdc39-005 | 33824962-33826540 | retained_intron | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001FH | CIL_0001FH_0002 | CGP | 3:32949408-33814860 |
| CIL_00081N | CIL_00081N_0002 | VISTA | 3:33582396-34183856 |
| CIL_00081O | CIL_00081O_0002 | VISTA | 3:33605209-34206178 |
| CIL_0001FQ | CIL_0001FQ_0002 | CGP | 3:33799955-33844310 |
| CIL_0008UV | CIL_0008UV_0002 | VISTA | 3:33803627-34405807 |
| CIL_0001FR | CIL_0001FR_0002 | CGP | 3:33812362-34069342 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001947 | IEA | heart looping |
| GO:0003674 | ND | molecular_function |
| GO:0005856 | IEA | cytoskeleton |
| GO:0005930 | ISS | axoneme |
| GO:0030324 | IEA | lung development |
| GO:0035469 | IEA | determination of pancreatic left/right asymmetry |
| GO:0060285 | ISS | cilium-dependent cell motility |
| GO:0060287 | ISS | epithelial cilium movement involved in determination of left/right asymmetry |
| GO:0070286 | ISS | axonemal dynein complex assembly |
| GO:0071907 | IEA | determination of digestive tract left/right asymmetry |
| GO:0071910 | IEA | determination of liver left/right asymmetry |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000016485
|
CCDC39 | coiled-coil domain containing 39 | protein_coding | Danio_rerio | |
|
ENSG00000145075
|
CCDC39 | coiled-coil domain containing 39 | protein_coding | Homo_sapiens | |
