C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adenosine deaminase domain containing 1 (testis specific)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027719 Adad1 10090 + 3:37063527-37121924 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029274 Adad1-004 37063631-37111515 protein_coding
  ENSMUST00000141736 Adad1-005 37063678-37067356 retained_intron
  ENSMUST00000144629 Adad1-001 37063527-37112512 protein_coding
  ENSMUST00000147773 Adad1-002 37085090-37121924 protein_coding
  ENSMUST00000148157 Adad1-003 37084953-37092129 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000029274ENSMUST00000141736ENSMUST00000144629ENSMUST00000147773ENSMUST00000148157
Transcript ID Adipose Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000029274 0.021±0.00 0.008±0.00 0.019±0.01 0.019±0.00 0.016±0.00 0.015±0.00 0.040±0.01 29.703±8.18
ENSMUST00000141736 N/A 0.005±0.00 0.020±0.00 N/A 0.039±0.03 0.065±0.00 0.110±0.06 N/A
ENSMUST00000144629 N/A 0.005±0.00 0.005±0.00 N/A 0.008±0.00 N/A 0.014±0.01 21.463±6.39
ENSMUST00000147773 0.100±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000148157 N/A N/A N/A N/A 0.059±0.04 N/A 0.109±0.08 71.965±6.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AD CIL_0007AD_0002 CGP 3:36863106-37121924
CIL_0007AE CIL_0007AE_0002 CGP 3:37063527-37125959

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IDA RNA binding
GO:0004000 IEA adenosine deaminase activity
GO:0005634 IDA nucleus
GO:0006396 IEA RNA processing
GO:0007275 IEA multicellular organismal development
GO:0007286 IMP spermatid development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089181 ADAD1 adenosine deaminase domain containing 1 (testis-specific) protein_coding Danio_rerio
ENSG00000164113 ADAD1 adenosine deaminase domain containing 1 (testis-specific) protein_coding Homo_sapiens

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