Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	solute carrier family 16 (monocarboxylic acid transporters), member 4
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000027896	Slc16a4	10090	+	3:107291230-107312115	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000029502		Slc16a4-001	107291230-107312115	protein_coding
	ENSMUST00000106723		Slc16a4-003	107291315-107307717	protein_coding
	ENSMUST00000153322		Slc16a4-002	107291294-107302553	retained_intron

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000029502	0.636±0.42	N/A	0.507±0.00	0.264±0.11	N/A	0.177±0.08	23.999±2.04	0.037±0.00	0.254±0.09	0.247±0.00	0.772±0.40	4.429±4.28	0.248±0.11
ENSMUST00000106723	0.204±0.00	0.250±0.13	N/A	0.227±0.04	0.079±0.02	0.122±0.07	10.442±3.48	0.070±0.00	0.116±0.00	N/A	1.008±0.22	3.001±0.00	0.288±0.09
ENSMUST00000153322	0.258±0.00	N/A	N/A	0.182±0.08	0.082±0.03	0.028±0.01	N/A	0.055±0.00	0.141±0.05	N/A	0.257±0.00	1.793±0.46	0.107±0.05

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00075S	CIL_00075S_0002	CGP	3:107278858-107312115
CIL_00075R	CIL_00075R_0002	CGP	3:107291230-107333289

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0005575	ND	cellular_component
GO:0005886	IEA	plasma membrane
GO:0015293	IEA	symporter activity
GO:0016021	IEA	integral component of membrane
GO:0055085	IEA	transmembrane transport

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000042807	slc16a4	solute carrier family 16 (monocarboxylic acid transporters), member 4	protein_coding	Danio_rerio
ENSG00000168679	SLC16A4	solute carrier family 16, member 4	protein_coding	Homo_sapiens

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