Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	RAP1, GTP-GDP dissociation stimulator 1
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000028149	Rap1gds1	10090	-	3:138925906-139075199	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000029796		Rap1gds1-201	138925906-139075199	protein_coding
	ENSMUST00000098574		Rap1gds1-202	138925906-139075199	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000029796	7.119±2.04	8.702±1.52	4.864±1.05	29.936±31.43	5.442±0.96	4.045±1.00	2.711±0.99	4.386±1.23	1.303±0.42	3.640±1.04	9.924±1.88	5.595±3.41	4.509±3.36	0.908±0.25
ENSMUST00000098574	8.097±2.68	5.351±1.27	5.309±0.68	8.201±2.25	7.884±1.25	6.289±1.68	3.881±0.76	8.610±1.25	3.845±0.93	7.140±1.67	3.016±0.80	6.095±2.71	6.230±1.83	0.628±0.11

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008LO	CIL_0008LO_0002	VISTA	3:138442669-139045155

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0005739	IEA	mitochondrion
GO:0005783	IEA	endoplasmic reticulum
GO:0005829	IEA	cytosol
GO:0014829	IEA	vascular smooth muscle contraction
GO:0031034	IEA	myosin filament assembly
GO:0032321	IEA	positive regulation of Rho GTPase activity
GO:0032471	IEA	negative regulation of endoplasmic reticulum calcium ion concentration
GO:0051561	IEA	positive regulation of mitochondrial calcium ion concentration
GO:0070062	IEA	extracellular vesicular exosome

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000073741	RAP1GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein_coding	Danio_rerio
ENSG00000138698	RAP1GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein_coding	Homo_sapiens

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