C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700003M02 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028294 1700003M02Rik 10090 - 4:34688559-34730206 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029971 1700003M02Rik-001 34688559-34730206 protein_coding
  ENSMUST00000108136 1700003M02Rik-002 34711332-34730178 protein_coding
  ENSMUST00000135563 1700003M02Rik-004 34688961-34719609 processed_transcript
  ENSMUST00000137514 1700003M02Rik-003 34721416-34730195 protein_coding
  ENSMUST00000160209 1700003M02Rik-006 34723560-34730195 processed_transcript
  ENSMUST00000162495 1700003M02Rik-005 34721385-34730195 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029971ENSMUST00000108136ENSMUST00000135563ENSMUST00000137514ENSMUST00000160209ENSMUST00000162495
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029971 0.058±0.01 0.187±0.05 0.519±0.10 N/A 0.142±0.03 0.055±0.00 0.057±0.01 0.005±0.00 2.667±0.34 N/A 1.400±1.09 0.036±0.01 166.784±44.01
ENSMUST00000108136 N/A 0.052±0.00 N/A 0.060±0.00 0.098±0.05 0.191±0.12 0.050±0.02 0.009±0.00 N/A N/A 2.211±1.14 0.026±0.01 92.233±0.00
ENSMUST00000135563 N/A N/A N/A N/A 0.385±0.00 0.130±0.08 N/A 0.016±0.00 N/A N/A N/A 0.059±0.00 N/A
ENSMUST00000137514 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A 0.657±0.16 0.164±0.00 N/A
ENSMUST00000160209 N/A N/A N/A N/A 0.282±0.15 0.095±0.00 0.089±0.00 N/A N/A 0.128±0.00 1.369±0.66 N/A N/A
ENSMUST00000162495 N/A N/A N/A N/A N/A N/A 0.080±0.04 N/A N/A N/A 1.365±0.63 0.127±0.10 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021997 C20H6orf165 chromosome 6 open reading frame 165 protein_coding Danio_rerio
ENSG00000213204 C6orf165 chromosome 6 open reading frame 165 protein_coding Homo_sapiens
ENSG00000272514 C6orf165 chromosome 6 open reading frame 165 protein_coding Homo_sapiens

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