C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycoprotein hormones, alpha subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028298 Cga 10090 + 4:34893779-34907370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029975 Cga-001 34893779-34907370 protein_coding
  ENSMUST00000108130 Cga-003 34893788-34907178 protein_coding
  ENSMUST00000135871 Cga-002 34893788-34907132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryPlacentaTestisENSMUST00000029975ENSMUST00000108130ENSMUST00000135871
Transcript ID Breast Liver Ovary Placenta Testis
ENSMUST00000029975 N/A 0.062±0.02 N/A N/A 0.063±0.00
ENSMUST00000108130 N/A 0.094±0.03 0.079±0.00 0.011±0.00 N/A
ENSMUST00000135871 0.150±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CG CIL_0001CG_0002 CGP 4:34803113-34907370

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005179 IEA hormone activity
GO:0005576 IEA extracellular region
GO:0006590 IMP thyroid hormone generation
GO:0008406 IMP gonad development
GO:0030878 IMP thyroid gland development
GO:0032275 IMP luteinizing hormone secretion
GO:0032870 IMP cellular response to hormone stimulus
GO:0046621 IMP negative regulation of organ growth
GO:0046884 IMP follicle-stimulating hormone secretion
GO:0048589 IMP developmental growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040479 cga glycoprotein hormones, alpha polypeptide protein_coding Danio_rerio
ENSG00000135346 CGA glycoprotein hormones, alpha polypeptide protein_coding Homo_sapiens

Loading