C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 38B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028420 Tmem38b 10090 + 4:53826045-53862019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030127 Tmem38b-001 53826045-53862019 protein_coding
  ENSMUST00000144167 Tmem38b-003 53840470-53854332 protein_coding
  ENSMUST00000150803 Tmem38b-002 53826055-53832688 processed_transcript
  ENSMUST00000151206 Tmem38b-004 53826057-53847844 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030127ENSMUST00000144167ENSMUST00000151206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030127 5.820±1.27 2.348±0.30 9.893±2.58 1.455±0.46 2.632±0.37 3.170±0.82 3.567±0.67 5.805±1.19 6.663±3.82 5.215±0.75 17.941±1.38 2.065±0.69 7.451±3.91 5.123±1.35
ENSMUST00000144167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.014±0.00 7.836±2.31 16.038±0.00
ENSMUST00000151206 2.833±0.03 22.722±4.79 N/A N/A 2.674±0.30 5.443±2.38 3.539±0.00 9.219±1.30 36.251±2.67 6.689±2.66 N/A 3.645±0.69 N/A 6.395±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064K CIL_00064K_0002 CGP 4:53779705-53862019
CIL_0001JX CIL_0001JX_0002 CGP 4:53826045-55083563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005261 IEA cation channel activity
GO:0005267 IEA potassium channel activity
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0015672 IEA monovalent inorganic cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0071805 IEA potassium ion transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041562 CABZ01079427.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000095209 TMEM38B transmembrane protein 38B protein_coding Homo_sapiens

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