C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028521 Slc35d1 10090 - 4:103170649-103215164 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036195 Slc35d1-002 103170656-103214803 protein_coding
  ENSMUST00000094947 Slc35d1-006 103210332-103214799 protein_coding
  ENSMUST00000150285 Slc35d1-001 103170649-103215164 protein_coding
  ENSMUST00000154845 Slc35d1-005 103210553-103214672 processed_transcript
  ENSMUST00000183432 Slc35d1-003 103201161-103214803 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036195ENSMUST00000150285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036195 1.250±0.20 1.868±0.46 3.185±0.04 1.117±0.56 1.406±0.53 3.739±0.18 1.196±0.34 4.651±1.48 9.250±5.13 1.583±0.21 1.229±0.37 6.608±3.17 5.560±2.31 1.784±0.99
ENSMUST00000150285 0.598±0.21 N/A N/A 0.139±0.00 0.214±0.00 6.329±3.48 0.446±0.00 2.220±0.94 3.981±3.35 0.700±0.00 0.897±0.00 4.650±0.00 0.984±0.03 0.497±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069G CIL_00069G_0002 CGP 4:103114390-103215164
CIL_00069F CIL_00069F_0002 CGP 4:103170649-103290863

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0015165 IDA pyrimidine nucleotide-sugar transmembrane transporter activity
GO:0015781 IDA pyrimidine nucleotide-sugar transport
GO:0016021 IEA integral component of membrane
GO:0030206 IMP chondroitin sulfate biosynthetic process
GO:0048706 IMP embryonic skeletal system development
GO:0090481 IDA pyrimidine nucleotide-sugar transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011973 slc35d1a solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1a protein_coding Danio_rerio
ENSDARG00000027986 slc35d1b solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b protein_coding Danio_rerio
ENSG00000116704 SLC35D1 solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 protein_coding Homo_sapiens

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