C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calreticulin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028558 Calr4 10090 + 4:109234485-109254571 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030285 Calr4-003 109235632-109254251 protein_coding
  ENSMUST00000106628 Calr4-002 109235413-109254345 protein_coding
  ENSMUST00000106629 Calr4-005 109234485-109254251 protein_coding
  ENSMUST00000106631 Calr4-001 109235262-109254571 protein_coding
  ENSMUST00000141555 Calr4-004 109244582-109253823 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030285ENSMUST00000106628ENSMUST00000106629ENSMUST00000106631ENSMUST00000141555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030285 0.038±0.02 0.040±0.00 N/A 0.116±0.02 0.140±0.14 0.060±0.00 N/A 0.024±0.01 0.025±0.01 0.081±0.03 0.018±0.01 0.555±0.47 0.155±0.13 1.120±0.68
ENSMUST00000106628 0.062±0.00 N/A N/A 0.128±0.06 N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A
ENSMUST00000106629 0.065±0.01 0.054±0.01 0.020±0.01 N/A 0.065±0.02 N/A N/A 0.010±0.00 0.040±0.02 0.051±0.01 0.027±0.01 0.250±0.22 0.095±0.00 N/A
ENSMUST00000106631 0.075±0.00 N/A N/A 0.059±0.00 N/A N/A 0.052±0.00 N/A 0.033±0.01 0.061±0.00 0.050±0.00 N/A N/A 0.524±0.30
ENSMUST00000141555 0.228±0.00 N/A N/A 0.498±0.00 N/A N/A 0.072±0.00 0.119±0.03 N/A 0.125±0.00 N/A 0.342±0.20 0.405±0.35 18.138±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0008150 ND biological_process
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020103 calrl calreticulin like protein_coding Danio_rerio
ENSDARG00000043276 calr calreticulin protein_coding Danio_rerio

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