C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII) N-terminal and central domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028619 Tceanc2 10090 - 4:107134155-107179116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030362 Tceanc2-005 107139533-107179103 protein_coding
  ENSMUST00000057043 Tceanc2-001 107134155-107178547 protein_coding
  ENSMUST00000058585 Tceanc2-010 107139577-107178282 protein_coding
  ENSMUST00000127720 Tceanc2-004 107139270-107178366 nonsense_mediated_decay
  ENSMUST00000129220 Tceanc2-006 107139325-107178283 processed_transcript
  ENSMUST00000131474 Tceanc2-002 107176616-107177668 processed_transcript
  ENSMUST00000132526 Tceanc2-007 107165658-107177851 processed_transcript
  ENSMUST00000141165 Tceanc2-009 107139697-107179116 protein_coding
  ENSMUST00000147375 Tceanc2-003 107173008-107178208 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverMuscleOvaryTestisENSMUST00000057043ENSMUST00000129220ENSMUST00000141165
Transcript ID Adipose Brain Breast Liver Muscle Ovary Testis
ENSMUST00000057043 3.282±0.09 2.466±0.48 3.352±0.93 1.898±0.53 2.395±0.16 3.002±0.32 2.830±1.25
ENSMUST00000129220 N/A N/A N/A N/A N/A N/A 18.429±0.00
ENSMUST00000141165 N/A N/A N/A N/A N/A N/A 9.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062919 tceanc2 transcription elongation factor A (SII) N-terminal and central domain containing 2 protein_coding Danio_rerio
ENSG00000116205 TCEANC2 transcription elongation factor A (SII) N-terminal and central domain containing 2 protein_coding Homo_sapiens

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