C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: erythroblast membrane-associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028644 Ermap 10090 - 4:119175457-119190011 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030396 Ermap-002 119175591-119189976 nonsense_mediated_decay
  ENSMUST00000124626 Ermap-008 119185753-119189951 protein_coding
  ENSMUST00000127574 Ermap-001 119177548-119189976 retained_intron
  ENSMUST00000133956 Ermap-009 119185692-119188747 protein_coding
  ENSMUST00000137080 Ermap-007 119178556-119189956 processed_transcript
  ENSMUST00000138395 Ermap-003 119175457-119190011 protein_coding
  ENSMUST00000141227 Ermap-005 119187195-119189996 nonsense_mediated_decay
  ENSMUST00000150864 Ermap-006 119187328-119189993 nonsense_mediated_decay
  ENSMUST00000156746 Ermap-004 119187336-119190011 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030396ENSMUST00000124626ENSMUST00000127574ENSMUST00000133956ENSMUST00000137080ENSMUST00000138395ENSMUST00000141227ENSMUST00000150864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030396 0.070±0.04 0.086±0.02 N/A 0.175±0.02 0.104±0.02 0.062±0.03 0.026±0.02 0.042±0.01 25.951±26.38 0.089±0.02 0.019±0.00 0.392±0.22 1.964±1.05 0.085±0.05
ENSMUST00000124626 N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A 0.125±0.00 N/A 0.631±0.00 N/A N/A
ENSMUST00000127574 0.032±0.02 0.091±0.02 N/A 0.097±0.00 0.077±0.04 0.145±0.00 0.061±0.00 0.011±0.00 22.344±13.69 0.074±0.01 N/A 0.424±0.32 2.121±0.71 0.040±0.00
ENSMUST00000133956 N/A 0.350±0.00 N/A N/A 0.118±0.01 0.122±0.04 N/A N/A N/A 0.245±0.00 N/A 0.772±0.16 N/A 0.047±0.00
ENSMUST00000137080 N/A 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138395 N/A N/A 0.082±0.02 0.077±0.02 N/A N/A N/A N/A 46.815±20.81 N/A 0.021±0.00 0.372±0.29 1.720±0.87 0.085±0.00
ENSMUST00000141227 N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150864 N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0005886 ISA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0031410 IDA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004109 CR846080.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000039257 si:ch73-137d22.1 si:ch73-137d22.1 protein_coding Danio_rerio
ENSDARG00000056798 zgc:123297 zgc:123297 protein_coding Danio_rerio
ENSDARG00000079170 zgc:162154 zgc:162154 protein_coding Danio_rerio
ENSG00000164010 ERMAP erythroblast membrane-associated protein (Scianna blood group) protein_coding Homo_sapiens

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