C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: c-myc binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028647 Mycbp 10090 + 4:123904832-123912269 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030400 Mycbp-001 123904832-123912269 protein_coding
  ENSMUST00000106202 Mycbp-002 123904914-123911076 protein_coding
  ENSMUST00000137685 Mycbp-004 123905136-123911242 processed_transcript
  ENSMUST00000147340 Mycbp-003 123905041-123909723 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030400ENSMUST00000137685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030400 8.539±1.63 10.514±1.99 8.625±0.79 3.197±1.64 8.004±1.41 5.789±1.40 7.355±0.62 9.882±1.42 8.352±3.33 9.500±0.70 4.215±0.41 14.119±4.74 11.503±5.27 20.984±3.25
ENSMUST00000137685 N/A N/A N/A 13.989±0.00 N/A N/A N/A N/A N/A N/A N/A 48.048±0.00 134.622±16.06 160.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0008PZ CIL_0008PZ_0002 VISTA 4:123735337-124336861

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 ISS transcription coactivator activity
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091001 mycbp c-myc binding protein protein_coding Danio_rerio
ENSG00000214114 MYCBP MYC binding protein protein_coding Homo_sapiens
ENSG00000274944 GJA9-MYCBP GJA9-MYCBP readthrough protein_coding Homo_sapiens

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