C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase 4a2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028788 Ptp4a2 10090 + 4:129811219-129850003 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030578 Ptp4a2-001 129820221-129849978 protein_coding
  ENSMUST00000127558 Ptp4a2-004 129820680-129839196 processed_transcript
  ENSMUST00000132386 Ptp4a2-003 129811219-129839232 processed_transcript
  ENSMUST00000132411 Ptp4a2-002 129811222-129812521 retained_intron
  ENSMUST00000133662 Ptp4a2-005 129820721-129839366 processed_transcript
  ENSMUST00000141754 Ptp4a2-006 129839151-129846501 processed_transcript
  ENSMUST00000165853 Ptp4a2-201 129820708-129850003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030578ENSMUST00000133662ENSMUST00000141754ENSMUST00000165853
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030578 21.698±4.16 47.084±21.36 34.849±0.54 28.699±4.36 29.267±6.35 46.435±7.54 20.280±0.99 18.948±1.67 21.535±8.08 25.208±5.15 129.391±9.10 36.064±17.74 15.428±10.39 9.595±3.90
ENSMUST00000133662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 161.016±0.00 N/A
ENSMUST00000141754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.037±9.98 N/A
ENSMUST00000165853 8.971±0.43 N/A 18.595±0.66 4.003±0.00 28.718±0.00 N/A 6.868±1.84 4.690±0.00 6.962±1.02 12.873±0.62 51.958±14.19 64.939±15.10 16.834±7.67 6.580±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035676 ptp4a2b protein tyrosine phosphatase type IVA, member 2b protein_coding Danio_rerio
ENSDARG00000087443 ptp4a2a protein tyrosine phosphatase type IVA, member 2a protein_coding Danio_rerio
ENSG00000184007 PTP4A2 protein tyrosine phosphatase type IVA, member 2 protein_coding Homo_sapiens

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