C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 50A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028822 Tmem50a 10090 - 4:134897849-134915024 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030626 Tmem50a-001 134897849-134915024 protein_coding
  ENSMUST00000105863 Tmem50a-002 134898391-134915015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030626ENSMUST00000105863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030626 58.593±10.62 63.532±4.40 71.653±6.23 28.493±5.05 43.530±12.15 23.740±3.83 33.377±3.82 46.060±9.09 46.854±7.79 67.025±3.52 20.054±0.88 33.987±10.56 24.382±9.28 5.923±2.32
ENSMUST00000105863 20.465±2.76 95.272±8.04 N/A 37.553±0.00 36.590±6.68 17.629±2.44 11.267±1.96 13.978±2.04 13.540±1.46 28.510±4.99 N/A 42.261±6.60 24.490±3.28 2.761±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WX CIL_0001WX_0002 CGP 4:134864536-134915024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015757 tmem50a transmembrane protein 50A protein_coding Danio_rerio
ENSG00000183726 TMEM50A transmembrane protein 50A protein_coding Homo_sapiens

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