Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	gamma-aminobutyric acid (GABA) A receptor, subunit delta
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000029054	Gabrd	10090	-	4:155384980-155398112	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000030925		Gabrd-001	155384980-155398112	protein_coding
	ENSMUST00000129892		Gabrd-003	155388565-155398036	processed_transcript
	ENSMUST00000150423		Gabrd-002	155384980-155398047	processed_transcript

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000030925	0.258±0.10	0.563±0.11	0.237±0.06	5.796±7.97	0.121±0.06	0.436±0.31	0.047±0.03	0.230±0.06	0.030±0.02	0.410±0.17	0.136±0.06	0.293±0.23	0.412±0.18	0.085±0.05
ENSMUST00000150423	0.091±0.05	N/A	0.059±0.02	0.465±0.58	0.037±0.02	0.138±0.10	0.066±0.00	0.037±0.01	0.013±0.00	0.138±0.05	0.057±0.00	0.104±0.05	0.065±0.02	0.015±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007QV	CIL_0007QV_0002	VISTA	4:154934679-155536167

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0004890	IEA	GABA-A receptor activity
GO:0005230	IEA	extracellular ligand-gated ion channel activity
GO:0005254	IEA	chloride channel activity
GO:0007165	IEA	signal transduction
GO:0007268	IEA	synaptic transmission
GO:0030054	IEA	cell junction
GO:0034707	IEA	chloride channel complex
GO:0045211	IEA	postsynaptic membrane
GO:1902476	IEA	chloride transmembrane transport

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000059763	gabrd	gamma-aminobutyric acid (GABA) A receptor, delta	protein_coding	Danio_rerio
ENSG00000187730	GABRD	gamma-aminobutyric acid (GABA) A receptor, delta	protein_coding	Homo_sapiens

Loading