C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029155 Spata18 10090 + 5:73651380-73679484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041422 Spata18-201 73651380-73679096 protein_coding
  ENSMUST00000071077 Spata18-202 73651380-73679484 protein_coding
  ENSMUST00000113548 Spata18-203 73657535-73679482 protein_coding
  ENSMUST00000178631 Spata18-204 73651380-73679096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041422ENSMUST00000071077ENSMUST00000113548ENSMUST00000178631
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041422 N/A 0.075±0.00 N/A 0.202±0.00 N/A 0.191±0.06 N/A N/A N/A N/A 2.932±0.54 0.018±0.00 N/A
ENSMUST00000071077 N/A N/A 0.023±0.00 N/A N/A 0.172±0.06 N/A N/A 7.550±1.56 N/A 3.984±2.64 N/A 209.543±5.96
ENSMUST00000113548 0.044±0.02 N/A 0.006±0.00 0.254±0.00 0.036±0.01 0.222±0.00 0.057±0.03 0.016±0.01 3.621±1.00 0.030±0.00 2.906±1.18 0.008±0.00 N/A
ENSMUST00000178631 N/A N/A N/A 0.276±0.00 0.055±0.00 0.110±0.00 0.069±0.01 0.021±0.00 N/A 0.032±0.00 4.666±0.00 0.016±0.00 62.760±14.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CP CIL_0001CP_0002 CGP 5:73632749-73679484
CIL_0001CQ CIL_0001CQ_0002 CGP 5:73651380-74068430

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005741 IEA mitochondrial outer membrane
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0033554 IEA cellular response to stress
GO:0035694 ISS mitochondrial protein catabolic process
GO:0035695 ISS mitochondrion degradation by induced vacuole formation
GO:0036126 IEA sperm flagellum
GO:0043231 ISS intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052343 spata18 spermatogenesis associated 18 protein_coding Danio_rerio
ENSG00000163071 SPATA18 spermatogenesis associated 18 protein_coding Homo_sapiens

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